WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.7b.3 Sequence Name  C18E3.7b.3
Length (nt)  2877   Chromosome Location  I: 4185174-4189934
Chromosome . Primary Identifier  I Chromosome Location . Start  4185174
Chromosome Location . End  4189934 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.7b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004093 ppw-1 C18E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.7b C18E3.7b 165   I: 4186562-4186681

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7b.3 4185174 4189934 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9167   56   I: 4185174-4185229 Caenorhabditis elegans
Exon9173   133   I: 4186549-4186681 Caenorhabditis elegans
Exon9179   254   I: 4186770-4187023 Caenorhabditis elegans
Exon9187   200   I: 4187166-4187365 Caenorhabditis elegans
Exon9195   60   I: 4187412-4187471 Caenorhabditis elegans
Exon9203   119   I: 4187520-4187638 Caenorhabditis elegans
Exon9212   443   I: 4187695-4188137 Caenorhabditis elegans
Exon9221   287   I: 4188186-4188472 Caenorhabditis elegans
Exon9229   397   I: 4188518-4188914 Caenorhabditis elegans
Exon9238   656   I: 4188961-4189616 Caenorhabditis elegans
Exon9250   272   I: 4189663-4189934 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7b.3 4185174 4189934 1

1 Sequence

Length
2877

1 Sequence Ontology Term

Identifier Name Description
transcript