WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.7d.1 Sequence Name  C18E3.7d.1
Length (nt)  2890   Chromosome Location  I: 4185174-4189912
Chromosome . Primary Identifier  I Chromosome Location . Start  4185174
Chromosome Location . End  4189912 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.7d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004093 ppw-1 C18E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.7d C18E3.7d 2094   I: 4187331-4187365

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7d.1 4185174 4189912 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9168   56   I: 4185174-4185229 Caenorhabditis elegans
Exon9174   168   I: 4186549-4186716 Caenorhabditis elegans
Exon9182   254   I: 4186770-4187023 Caenorhabditis elegans
Exon9189   200   I: 4187166-4187365 Caenorhabditis elegans
Exon9197   60   I: 4187412-4187471 Caenorhabditis elegans
Exon9206   119   I: 4187520-4187638 Caenorhabditis elegans
Exon9215   443   I: 4187695-4188137 Caenorhabditis elegans
Exon9224   287   I: 4188186-4188472 Caenorhabditis elegans
Exon9232   397   I: 4188518-4188914 Caenorhabditis elegans
Exon9241   656   I: 4188961-4189616 Caenorhabditis elegans
Exon9247   250   I: 4189663-4189912 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7d.1 4185174 4189912 1

1 Sequence

Length
2890

1 Sequence Ontology Term

Identifier Name Description
transcript