WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.7d.2 Sequence Name  C18E3.7d.2
Length (nt)  2861   Chromosome Location  I: 4186524-4189914
Chromosome . Primary Identifier  I Chromosome Location . Start  4186524
Chromosome Location . End  4189914 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.7d.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004093 ppw-1 C18E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.7d C18E3.7d 2094   I: 4187331-4187365

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7d.2 4186524 4189914 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9169   193   I: 4186524-4186716 Caenorhabditis elegans
Exon9183   254   I: 4186770-4187023 Caenorhabditis elegans
Exon9190   200   I: 4187166-4187365 Caenorhabditis elegans
Exon9198   60   I: 4187412-4187471 Caenorhabditis elegans
Exon9207   119   I: 4187520-4187638 Caenorhabditis elegans
Exon9216   443   I: 4187695-4188137 Caenorhabditis elegans
Exon9225   287   I: 4188186-4188472 Caenorhabditis elegans
Exon9233   397   I: 4188518-4188914 Caenorhabditis elegans
Exon9242   656   I: 4188961-4189616 Caenorhabditis elegans
Exon9248   252   I: 4189663-4189914 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7d.2 4186524 4189914 1

1 Sequence

Length
2861

1 Sequence Ontology Term

Identifier Name Description
transcript