WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.7b.1 Sequence Name  C18E3.7b.1
Length (nt)  2798   Chromosome Location  I: 4186549-4189911
Chromosome . Primary Identifier  I Chromosome Location . Start  4186549
Chromosome Location . End  4189911 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004093 ppw-1 C18E3.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.7b C18E3.7b 165   I: 4186562-4186681

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7b.1 4186549 4189911 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9176   133   I: 4186549-4186681 Caenorhabditis elegans
Exon9177   254   I: 4186770-4187023 Caenorhabditis elegans
Exon9185   200   I: 4187166-4187365 Caenorhabditis elegans
Exon9193   60   I: 4187412-4187471 Caenorhabditis elegans
Exon9201   119   I: 4187520-4187638 Caenorhabditis elegans
Exon9210   443   I: 4187695-4188137 Caenorhabditis elegans
Exon9219   287   I: 4188186-4188472 Caenorhabditis elegans
Exon9228   397   I: 4188518-4188914 Caenorhabditis elegans
Exon9237   656   I: 4188961-4189616 Caenorhabditis elegans
Exon9246   249   I: 4189663-4189911 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.7b.1 4186549 4189911 1

1 Sequence

Length
2798

1 Sequence Ontology Term

Identifier Name Description
transcript