WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C18E3.3.1 Sequence Name  C18E3.3.1
Length (nt)  2881   Chromosome Location  I: 4203458-4208532
Chromosome . Primary Identifier  I Chromosome Location . Start  4203458
Chromosome Location . End  4208532 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015972 C18E3.3 C18E3.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C18E3.3 C18E3.3 2682   I: 4203460-4203534

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.3.1 4203458 4208532 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9275   77   I: 4203458-4203534 Caenorhabditis elegans
Exon9276   122   I: 4203603-4203724 Caenorhabditis elegans
Exon9277   127   I: 4203772-4203898 Caenorhabditis elegans
Exon9278   100   I: 4203957-4204056 Caenorhabditis elegans
Exon9279   130   I: 4204111-4204240 Caenorhabditis elegans
Exon9280   584   I: 4204728-4205311 Caenorhabditis elegans
Exon9281   651   I: 4205813-4206463 Caenorhabditis elegans
Exon9282   442   I: 4206955-4207396 Caenorhabditis elegans
Exon9283   145   I: 4207448-4207592 Caenorhabditis elegans
Exon9284   503   I: 4208030-4208532 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C18E3.3.1 4203458 4208532 1

1 Sequence

Length
2881

1 Sequence Ontology Term

Identifier Name Description
transcript