WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C18E3.8 Sequence Name  C18E3.8
Length (nt)  1077   Chromosome Location  I: 4208592-4208795
Chromosome . Primary Identifier  I Chromosome Location . Start  4208592
Chromosome Location . End  4208795
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C18E3.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08317 HOP-1 39.8 358 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00077180
WBRNAi00065408
WBRNAi00065407
WBRNAi00040944
WBRNAi00040945
WBRNAi00088526
WBRNAi00088525
WBRNAi00088524
WBRNAi00088523
WBRNAi00027726
WBRNAi00116609
WBRNAi00065406
WBRNAi00062514
WBRNAi00022873
WBRNAi00022874

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C18E3.8 4208592 4208795 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001985 hop-1 C18E3.8 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C18E3.8 4208592 4208795 -1
CDS:C18E3.8 4209137 4209222 -1
CDS:C18E3.8 4209272 4209415 -1
CDS:C18E3.8 4209597 4209984 -1
CDS:C18E3.8 4210036 4210159 -1
CDS:C18E3.8 4210210 4210340 -1

1 Sequence

Length
1077

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C18E3.8.1 C18E3.8.1 1155   I: 4208515-4210341