WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.6d.1 Sequence Name  C43E11.6d.1
Length (nt)  2476   Chromosome Location  I: 4229577-4236040
Chromosome . Primary Identifier  I Chromosome Location . Start  4229577
Chromosome Location . End  4236040 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.6d C43E11.6d 1977   I: 4229915-4230007

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6d.1 4229577 4236040 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9320   92   I: 4229577-4229668 Caenorhabditis elegans
Exon9327   120   I: 4229888-4230007 Caenorhabditis elegans
Exon9334   96   I: 4230764-4230859 Caenorhabditis elegans
Exon9341   83   I: 4231143-4231225 Caenorhabditis elegans
Exon9353   208   I: 4232496-4232703 Caenorhabditis elegans
Exon9362   163   I: 4233072-4233234 Caenorhabditis elegans
Exon9372   207   I: 4233481-4233687 Caenorhabditis elegans
Exon9382   638   I: 4233886-4234523 Caenorhabditis elegans
Exon9392   348   I: 4234713-4235060 Caenorhabditis elegans
Exon9400   521   I: 4235520-4236040 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6d.1 4229577 4236040 1

1 Sequence

Length
2476

1 Sequence Ontology Term

Identifier Name Description
transcript