WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.6a.1 Sequence Name  C43E11.6a.1
Length (nt)  2667   Chromosome Location  I: 4229577-4236042
Chromosome . Primary Identifier  I Chromosome Location . Start  4229577
Chromosome Location . End  4236042 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.6a C43E11.6a 2166   I: 4229915-4230007

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.1 4229577 4236042 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9321   92   I: 4229577-4229668 Caenorhabditis elegans
Exon9325   120   I: 4229888-4230007 Caenorhabditis elegans
Exon9329   96   I: 4230764-4230859 Caenorhabditis elegans
Exon9338   83   I: 4231143-4231225 Caenorhabditis elegans
Exon9343   189   I: 4231574-4231762 Caenorhabditis elegans
Exon9349   208   I: 4232496-4232703 Caenorhabditis elegans
Exon9356   163   I: 4233072-4233234 Caenorhabditis elegans
Exon9366   207   I: 4233481-4233687 Caenorhabditis elegans
Exon9376   638   I: 4233886-4234523 Caenorhabditis elegans
Exon9386   348   I: 4234713-4235060 Caenorhabditis elegans
Exon9401   523   I: 4235520-4236042 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.1 4229577 4236042 1

1 Sequence

Length
2667

1 Sequence Ontology Term

Identifier Name Description
transcript