WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.6a.3 Sequence Name  C43E11.6a.3
Length (nt)  2520   Chromosome Location  I: 4229886-4236032
Chromosome . Primary Identifier  I Chromosome Location . Start  4229886
Chromosome Location . End  4236032 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6a.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.6a C43E11.6a 2166   I: 4229915-4230007

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.3 4229886 4236032 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9322   122   I: 4229886-4230007 Caenorhabditis elegans
Exon9331   96   I: 4230764-4230859 Caenorhabditis elegans
Exon9340   83   I: 4231143-4231225 Caenorhabditis elegans
Exon9345   189   I: 4231574-4231762 Caenorhabditis elegans
Exon9351   208   I: 4232496-4232703 Caenorhabditis elegans
Exon9358   163   I: 4233072-4233234 Caenorhabditis elegans
Exon9368   207   I: 4233481-4233687 Caenorhabditis elegans
Exon9378   638   I: 4233886-4234523 Caenorhabditis elegans
Exon9388   348   I: 4234713-4235060 Caenorhabditis elegans
Exon9396   399   I: 4235520-4235918 Caenorhabditis elegans
Exon9406   67   I: 4235966-4236032 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.6a.3 4229886 4236032 1

1 Sequence

Length
2520

1 Sequence Ontology Term

Identifier Name Description
transcript