WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C43E11.6b Sequence Name  C43E11.6b
Length (nt)  1686   Chromosome Location  I: 4229915-4230007
Chromosome . Primary Identifier  I Chromosome Location . Start  4229915
Chromosome Location . End  4230007
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.6b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE27846 NAB-1, isoform b 64.0 561 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00042385
WBRNAi00003144
WBRNAi00029761
WBRNAi00077331
WBRNAi00116849
WBRNAi00060404
WBRNAi00060405
WBRNAi00060406
WBRNAi00060407
WBRNAi00117197

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C43E11.6b 4229915 4230007 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003516 nab-1 C43E11.6 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:C43E11.6b 4229915 4230007 1
CDS:C43E11.6b 4230764 4230859 1
CDS:C43E11.6b 4233072 4233234 1
CDS:C43E11.6b 4233481 4233687 1
CDS:C43E11.6b 4233886 4234523 1
CDS:C43E11.6b 4234713 4235060 1
CDS:C43E11.6b 4235520 4235660 1

1 Sequence

Length
1686

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C43E11.6b.1 C43E11.6b.1 2190   I: 4229570-4236038
Transcript:C43E11.6b.2 C43E11.6b.2 2095   I: 4229886-4236040