WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.3b.1 Sequence Name  C43E11.3b.1
Length (nt)  5362   Chromosome Location  I: 4254197-4264695
Chromosome . Primary Identifier  I Chromosome Location . Start  4254197
Chromosome Location . End  4264695 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.3b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016603 met-1 C43E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.3b C43E11.3b 4773   I: 4255402-4255537

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.3b.1 4254197 4264695 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9439   213   I: 4254197-4254409 Caenorhabditis elegans
Exon9444   143   I: 4255395-4255537 Caenorhabditis elegans
Exon9447   77   I: 4255589-4255665 Caenorhabditis elegans
Exon9451   261   I: 4255716-4255976 Caenorhabditis elegans
Exon9455   353   I: 4256026-4256378 Caenorhabditis elegans
Exon9459   451   I: 4256430-4256880 Caenorhabditis elegans
Exon9463   135   I: 4256972-4257106 Caenorhabditis elegans
Exon9467   464   I: 4257702-4258165 Caenorhabditis elegans
Exon9471   766   I: 4258768-4259533 Caenorhabditis elegans
Exon9475   363   I: 4260171-4260533 Caenorhabditis elegans
Exon9479   730   I: 4261084-4261813 Caenorhabditis elegans
Exon9483   163   I: 4262246-4262408 Caenorhabditis elegans
Exon9487   796   I: 4262986-4263781 Caenorhabditis elegans
Exon9492   447   I: 4264249-4264695 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.3b.1 4254197 4264695 1

1 Sequence

Length
5362

1 Sequence Ontology Term

Identifier Name Description
transcript