WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C43E11.3a.1 Sequence Name  C43E11.3a.1
Length (nt)  5395   Chromosome Location  I: 4254269-4264699
Chromosome . Primary Identifier  I Chromosome Location . Start  4254269
Chromosome Location . End  4264699 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C43E11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016603 met-1 C43E11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C43E11.3a C43E11.3a 4815   I: 4254476-4254510

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.3a.1 4254269 4264699 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9440   242   I: 4254269-4254510 Caenorhabditis elegans
Exon9443   143   I: 4255395-4255537 Caenorhabditis elegans
Exon9446   77   I: 4255589-4255665 Caenorhabditis elegans
Exon9450   261   I: 4255716-4255976 Caenorhabditis elegans
Exon9454   353   I: 4256026-4256378 Caenorhabditis elegans
Exon9458   451   I: 4256430-4256880 Caenorhabditis elegans
Exon9462   135   I: 4256972-4257106 Caenorhabditis elegans
Exon9466   464   I: 4257702-4258165 Caenorhabditis elegans
Exon9470   766   I: 4258768-4259533 Caenorhabditis elegans
Exon9474   363   I: 4260171-4260533 Caenorhabditis elegans
Exon9478   730   I: 4261084-4261813 Caenorhabditis elegans
Exon9482   163   I: 4262246-4262408 Caenorhabditis elegans
Exon9486   796   I: 4262986-4263781 Caenorhabditis elegans
Exon9493   451   I: 4264249-4264699 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C43E11.3a.1 4254269 4264699 1

1 Sequence

Length
5395

1 Sequence Ontology Term

Identifier Name Description
transcript