WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK973.3.1 Sequence Name  ZK973.3.1
Length (nt)  1563   Chromosome Location  I: 4368089-4370463
Chromosome . Primary Identifier  I Chromosome Location . Start  4368089
Chromosome Location . End  4370463 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK973.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022832 pdp-1 ZK973.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK973.3 ZK973.3 1356   I: 4368106-4368182

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK973.3.1 4368089 4370463 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9697   94   I: 4368089-4368182 Caenorhabditis elegans
Exon9698   107   I: 4368241-4368347 Caenorhabditis elegans
Exon9699   122   I: 4368463-4368584 Caenorhabditis elegans
Exon9700   948   I: 4368828-4369775 Caenorhabditis elegans
Exon9701   292   I: 4370172-4370463 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK973.3.1 4368089 4370463 1

1 Sequence

Length
1563

1 Sequence Ontology Term

Identifier Name Description
transcript