WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T21E12.4a.1 Sequence Name  T21E12.4a.1
Length (nt)  13864   Chromosome Location  I: 4386785-4401907
Chromosome . Primary Identifier  I Chromosome Location . Start  4386785
Chromosome Location . End  4401907 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T21E12.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000962 dhc-1 T21E12.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T21E12.4a T21E12.4a 13707   I: 4386790-4387461

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T21E12.4a.1 4386785 4401907 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9740   677   I: 4386785-4387461 Caenorhabditis elegans
Exon9741   728   I: 4387509-4388236 Caenorhabditis elegans
Exon9742   992   I: 4388284-4389275 Caenorhabditis elegans
Exon9743   1809   I: 4389691-4391499 Caenorhabditis elegans
Exon9745   716   I: 4391552-4392267 Caenorhabditis elegans
Exon9747   393   I: 4392316-4392708 Caenorhabditis elegans
Exon9749   1034   I: 4392796-4393829 Caenorhabditis elegans
Exon9751   1075   I: 4393880-4394954 Caenorhabditis elegans
Exon9753   332   I: 4395151-4395482 Caenorhabditis elegans
Exon9755   3670   I: 4395558-4399227 Caenorhabditis elegans
Exon9757   160   I: 4399277-4399436 Caenorhabditis elegans
Exon9759   847   I: 4399484-4400330 Caenorhabditis elegans
Exon9761   880   I: 4400377-4401256 Caenorhabditis elegans
Exon9763   258   I: 4401306-4401563 Caenorhabditis elegans
Exon9766   293   I: 4401615-4401907 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T21E12.4a.1 4386785 4401907 1

1 Sequence

Length
13864

1 Sequence Ontology Term

Identifier Name Description
transcript