WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D11.3b.2 Sequence Name  C41D11.3b.2
Length (nt)  3310   Chromosome Location  I: 4428449-4444349
Chromosome . Primary Identifier  I Chromosome Location . Start  4428449
Chromosome Location . End  4444349 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D11.3b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016562 C41D11.3 C41D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D11.3b C41D11.3b 1599   I: 4428992-4429156

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.2 4428449 4444349 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9804   708   I: 4428449-4429156 Caenorhabditis elegans
Exon9814   225   I: 4429580-4429804 Caenorhabditis elegans
Exon9824   695   I: 4429988-4430682 Caenorhabditis elegans
Exon9834   328   I: 4430813-4431140 Caenorhabditis elegans
Exon9843   194   I: 4431731-4431924 Caenorhabditis elegans
Exon9853   81   I: 4440546-4440626 Caenorhabditis elegans
Exon9861   94   I: 4441669-4441762 Caenorhabditis elegans
Exon9868   116   I: 4441812-4441927 Caenorhabditis elegans
Exon9875   247   I: 4442605-4442851 Caenorhabditis elegans
Exon9880   468   I: 4443544-4444011 Caenorhabditis elegans
Exon9889   90   I: 4444067-4444156 Caenorhabditis elegans
Exon9898   64   I: 4444286-4444349 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.2 4428449 4444349 -1

1 Sequence

Length
3310

1 Sequence Ontology Term

Identifier Name Description
transcript