WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D11.3b.3 Sequence Name  C41D11.3b.3
Length (nt)  3269   Chromosome Location  I: 4428449-4444179
Chromosome . Primary Identifier  I Chromosome Location . Start  4428449
Chromosome Location . End  4444179 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D11.3b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016562 C41D11.3 C41D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D11.3b C41D11.3b 1599   I: 4428992-4429156

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.3 4428449 4444179 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9803   708   I: 4428449-4429156 Caenorhabditis elegans
Exon9815   225   I: 4429580-4429804 Caenorhabditis elegans
Exon9825   695   I: 4429988-4430682 Caenorhabditis elegans
Exon9835   328   I: 4430813-4431140 Caenorhabditis elegans
Exon9844   194   I: 4431731-4431924 Caenorhabditis elegans
Exon9854   81   I: 4440546-4440626 Caenorhabditis elegans
Exon9862   94   I: 4441669-4441762 Caenorhabditis elegans
Exon9869   116   I: 4441812-4441927 Caenorhabditis elegans
Exon9876   247   I: 4442605-4442851 Caenorhabditis elegans
Exon9881   468   I: 4443544-4444011 Caenorhabditis elegans
Exon9893   113   I: 4444067-4444179 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.3 4428449 4444179 -1

1 Sequence

Length
3269

1 Sequence Ontology Term

Identifier Name Description
transcript