WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D11.3b.5 Sequence Name  C41D11.3b.5
Length (nt)  2233   Chromosome Location  I: 4428449-4440628
Chromosome . Primary Identifier  I Chromosome Location . Start  4428449
Chromosome Location . End  4440628 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D11.3b.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016562 C41D11.3 C41D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D11.3b C41D11.3b 1599   I: 4428992-4429156

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.5 4428449 4440628 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9806   708   I: 4428449-4429156 Caenorhabditis elegans
Exon9817   225   I: 4429580-4429804 Caenorhabditis elegans
Exon9827   695   I: 4429988-4430682 Caenorhabditis elegans
Exon9837   328   I: 4430813-4431140 Caenorhabditis elegans
Exon9846   194   I: 4431731-4431924 Caenorhabditis elegans
Exon9858   83   I: 4440546-4440628 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3b.5 4428449 4440628 -1

1 Sequence

Length
2233

1 Sequence Ontology Term

Identifier Name Description
transcript