WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D11.3c.1 Sequence Name  C41D11.3c.1
Length (nt)  2772   Chromosome Location  I: 4428992-4444348
Chromosome . Primary Identifier  I Chromosome Location . Start  4428992
Chromosome Location . End  4444348 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D11.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016562 C41D11.3 C41D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D11.3c C41D11.3c 2766   I: 4428992-4429156

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3c.1 4428992 4444348 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9810   165   I: 4428992-4429156 Caenorhabditis elegans
Exon9819   225   I: 4429580-4429804 Caenorhabditis elegans
Exon9829   695   I: 4429988-4430682 Caenorhabditis elegans
Exon9839   328   I: 4430813-4431140 Caenorhabditis elegans
Exon9847   194   I: 4431731-4431924 Caenorhabditis elegans
Exon9856   81   I: 4440546-4440626 Caenorhabditis elegans
Exon9864   94   I: 4441669-4441762 Caenorhabditis elegans
Exon9871   116   I: 4441812-4441927 Caenorhabditis elegans
Exon9878   247   I: 4442605-4442851 Caenorhabditis elegans
Exon9886   474   I: 4443544-4444017 Caenorhabditis elegans
Exon9890   90   I: 4444067-4444156 Caenorhabditis elegans
Exon9897   63   I: 4444286-4444348 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3c.1 4428992 4444348 -1

1 Sequence

Length
2772

1 Sequence Ontology Term

Identifier Name Description
transcript