WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C41D11.3a.1 Sequence Name  C41D11.3a.1
Length (nt)  2636   Chromosome Location  I: 4429547-4444344
Chromosome . Primary Identifier  I Chromosome Location . Start  4429547
Chromosome Location . End  4444344 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41D11.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016562 C41D11.3 C41D11.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41D11.3a C41D11.3a 1467   I: 4429547-4429804

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3a.1 4429547 4444344 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon9812   258   I: 4429547-4429804 Caenorhabditis elegans
Exon9821   695   I: 4429988-4430682 Caenorhabditis elegans
Exon9831   328   I: 4430813-4431140 Caenorhabditis elegans
Exon9841   194   I: 4431731-4431924 Caenorhabditis elegans
Exon9851   81   I: 4440546-4440626 Caenorhabditis elegans
Exon9859   94   I: 4441669-4441762 Caenorhabditis elegans
Exon9866   116   I: 4441812-4441927 Caenorhabditis elegans
Exon9873   247   I: 4442605-4442851 Caenorhabditis elegans
Exon9883   474   I: 4443544-4444017 Caenorhabditis elegans
Exon9887   90   I: 4444067-4444156 Caenorhabditis elegans
Exon9896   59   I: 4444286-4444344 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C41D11.3a.1 4429547 4444344 -1

1 Sequence

Length
2636

1 Sequence Ontology Term

Identifier Name Description
transcript