WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01A4.1d Sequence Name  T01A4.1d
Length (nt)  3717   Chromosome Location  I: 4481238-4481348
Chromosome . Primary Identifier  I Chromosome Location . Start  4481238
Chromosome Location . End  4481348
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01A4.1d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43478 GCY-28, isoform d 140.8 1238 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052063
WBRNAi00052064
WBRNAi00034986
WBRNAi00034987

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01A4.1d 4481238 4481348 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020131 gcy-28 T01A4.1 Caenorhabditis elegans

20 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01A4.1d 4481238 4481348 1
CDS:T01A4.1d 4481434 4481576 1
CDS:T01A4.1d 4482154 4482421 1
CDS:T01A4.1d 4483442 4483585 1
CDS:T01A4.1d 4484299 4484419 1
CDS:T01A4.1d 4498008 4498122 1
CDS:T01A4.1d 4499008 4499209 1
CDS:T01A4.1d 4499693 4499920 1
CDS:T01A4.1d 4500472 4500591 1
CDS:T01A4.1d 4500647 4500922 1
CDS:T01A4.1d 4502570 4502899 1
CDS:T01A4.1d 4503270 4503469 1
CDS:T01A4.1d 4504425 4504569 1
CDS:T01A4.1d 4504638 4504809 1
CDS:T01A4.1d 4505062 4505217 1
CDS:T01A4.1d 4505722 4506038 1
CDS:T01A4.1d 4506668 4506905 1
CDS:T01A4.1d 4507152 4507310 1
CDS:T01A4.1d 4507484 4507582 1
CDS:T01A4.1d 4508035 4508207 1

1 Sequence

Length
3717

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01A4.1d.1 T01A4.1d.1 4490   I: 4481198-4508940