WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1B.5.1 Sequence Name  Y119C1B.5.1
Length (nt)  2433   Chromosome Location  I: 4511438-4516089
Chromosome . Primary Identifier  I Chromosome Location . Start  4511438
Chromosome Location . End  4516089 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1B.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022471 rnf-145 Y119C1B.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.5 Y119C1B.5 2229   I: 4511609-4511678

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.5.1 4511438 4516089 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10053   241   I: 4511438-4511678 Caenorhabditis elegans
Exon10054   140   I: 4512022-4512161 Caenorhabditis elegans
Exon10055   260   I: 4512207-4512466 Caenorhabditis elegans
Exon10056   92   I: 4512966-4513057 Caenorhabditis elegans
Exon10057   191   I: 4513105-4513295 Caenorhabditis elegans
Exon10058   370   I: 4513351-4513720 Caenorhabditis elegans
Exon10059   182   I: 4514266-4514447 Caenorhabditis elegans
Exon10060   239   I: 4514495-4514733 Caenorhabditis elegans
Exon10061   130   I: 4514790-4514919 Caenorhabditis elegans
Exon10062   206   I: 4515075-4515280 Caenorhabditis elegans
Exon10063   223   I: 4515606-4515828 Caenorhabditis elegans
Exon10064   159   I: 4515931-4516089 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.5.1 4511438 4516089 -1

1 Sequence

Length
2433

1 Sequence Ontology Term

Identifier Name Description
transcript