WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1B.8h.1 Sequence Name  Y119C1B.8h.1
Length (nt)  3010   Chromosome Location  I: 4525965-4534804
Chromosome . Primary Identifier  I Chromosome Location . Start  4525965
Chromosome Location . End  4534804 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1B.8h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022473 bet-1 Y119C1B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.8h Y119C1B.8h 2574   I: 4526395-4526490

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8h.1 4525965 4534804 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10071   526   I: 4525965-4526490 Caenorhabditis elegans
Exon10085   45   I: 4526551-4526595 Caenorhabditis elegans
Exon10093   63   I: 4526650-4526712 Caenorhabditis elegans
Exon10101   146   I: 4527742-4527887 Caenorhabditis elegans
Exon10109   189   I: 4528953-4529141 Caenorhabditis elegans
Exon10117   138   I: 4529872-4530009 Caenorhabditis elegans
Exon10125   217   I: 4530060-4530276 Caenorhabditis elegans
Exon10133   186   I: 4530591-4530776 Caenorhabditis elegans
Exon10141   657   I: 4531353-4532009 Caenorhabditis elegans
Exon10149   189   I: 4532577-4532765 Caenorhabditis elegans
Exon10157   324   I: 4533542-4533865 Caenorhabditis elegans
Exon10165   96   I: 4533920-4534015 Caenorhabditis elegans
Exon10173   171   I: 4534487-4534657 Caenorhabditis elegans
Exon10180   63   I: 4534742-4534804 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8h.1 4525965 4534804 -1

1 Sequence

Length
3010

1 Sequence Ontology Term

Identifier Name Description
transcript