WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1B.8c.1 Sequence Name  Y119C1B.8c.1
Length (nt)  2995   Chromosome Location  I: 4525966-4534805
Chromosome . Primary Identifier  I Chromosome Location . Start  4525966
Chromosome Location . End  4534805 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1B.8c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022473 bet-1 Y119C1B.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1B.8c Y119C1B.8c 2559   I: 4526395-4526490

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8c.1 4525966 4534805 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10074   525   I: 4525966-4526490 Caenorhabditis elegans
Exon10080   45   I: 4526551-4526595 Caenorhabditis elegans
Exon10087   54   I: 4526650-4526703 Caenorhabditis elegans
Exon10096   146   I: 4527742-4527887 Caenorhabditis elegans
Exon10104   183   I: 4528953-4529135 Caenorhabditis elegans
Exon10114   138   I: 4529872-4530009 Caenorhabditis elegans
Exon10120   217   I: 4530060-4530276 Caenorhabditis elegans
Exon10128   186   I: 4530591-4530776 Caenorhabditis elegans
Exon10136   657   I: 4531353-4532009 Caenorhabditis elegans
Exon10144   189   I: 4532577-4532765 Caenorhabditis elegans
Exon10152   324   I: 4533542-4533865 Caenorhabditis elegans
Exon10160   96   I: 4533920-4534015 Caenorhabditis elegans
Exon10168   171   I: 4534487-4534657 Caenorhabditis elegans
Exon10181   64   I: 4534742-4534805 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1B.8c.1 4525966 4534805 -1

1 Sequence

Length
2995

1 Sequence Ontology Term

Identifier Name Description
transcript