WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1007.15a.1 Sequence Name  D1007.15a.1
Length (nt)  3667   Chromosome Location  I: 4557653-4563759
Chromosome . Primary Identifier  I Chromosome Location . Start  4557653
Chromosome Location . End  4563759 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1007.15a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017010 D1007.15 D1007.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1007.15a D1007.15a 3513   I: 4557691-4557797

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1007.15a.1 4557653 4563759 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10221   145   I: 4557653-4557797 Caenorhabditis elegans
Exon10224   123   I: 4558188-4558310 Caenorhabditis elegans
Exon10227   307   I: 4558510-4558816 Caenorhabditis elegans
Exon10230   120   I: 4558977-4559096 Caenorhabditis elegans
Exon10233   206   I: 4559147-4559352 Caenorhabditis elegans
Exon10236   257   I: 4559437-4559693 Caenorhabditis elegans
Exon10240   239   I: 4559989-4560227 Caenorhabditis elegans
Exon10242   264   I: 4560298-4560561 Caenorhabditis elegans
Exon10244   232   I: 4560705-4560936 Caenorhabditis elegans
Exon10246   358   I: 4561168-4561525 Caenorhabditis elegans
Exon10248   238   I: 4561615-4561852 Caenorhabditis elegans
Exon10250   216   I: 4561895-4562110 Caenorhabditis elegans
Exon10252   255   I: 4562458-4562712 Caenorhabditis elegans
Exon10254   267   I: 4562889-4563155 Caenorhabditis elegans
Exon10256   123   I: 4563205-4563327 Caenorhabditis elegans
Exon10259   317   I: 4563443-4563759 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1007.15a.1 4557653 4563759 1

1 Sequence

Length
3667

1 Sequence Ontology Term

Identifier Name Description
transcript