WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1007.15b.1 Sequence Name  D1007.15b.1
Length (nt)  3640   Chromosome Location  I: 4557657-4563757
Chromosome . Primary Identifier  I Chromosome Location . Start  4557657
Chromosome Location . End  4563757 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1007.15b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017010 D1007.15 D1007.15 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1007.15b D1007.15b 3492   I: 4557691-4557776

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1007.15b.1 4557657 4563757 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10222   120   I: 4557657-4557776 Caenorhabditis elegans
Exon10225   123   I: 4558188-4558310 Caenorhabditis elegans
Exon10228   307   I: 4558510-4558816 Caenorhabditis elegans
Exon10231   120   I: 4558977-4559096 Caenorhabditis elegans
Exon10234   206   I: 4559147-4559352 Caenorhabditis elegans
Exon10237   257   I: 4559437-4559693 Caenorhabditis elegans
Exon10241   239   I: 4559989-4560227 Caenorhabditis elegans
Exon10243   264   I: 4560298-4560561 Caenorhabditis elegans
Exon10245   232   I: 4560705-4560936 Caenorhabditis elegans
Exon10247   358   I: 4561168-4561525 Caenorhabditis elegans
Exon10249   238   I: 4561615-4561852 Caenorhabditis elegans
Exon10251   216   I: 4561895-4562110 Caenorhabditis elegans
Exon10253   255   I: 4562458-4562712 Caenorhabditis elegans
Exon10255   267   I: 4562889-4563155 Caenorhabditis elegans
Exon10257   123   I: 4563205-4563327 Caenorhabditis elegans
Exon10258   315   I: 4563443-4563757 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1007.15b.1 4557657 4563757 1

1 Sequence

Length
3640

1 Sequence Ontology Term

Identifier Name Description
transcript