WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1007.1.1 Sequence Name  D1007.1.1
Length (nt)  914   Chromosome Location  I: 4568765-4570027
Chromosome . Primary Identifier  I Chromosome Location . Start  4568765
Chromosome Location . End  4570027 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1007.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000440 ceh-17 D1007.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1007.1 D1007.1 714   I: 4568962-4569284

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1007.1.1 4568765 4570027 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10271   520   I: 4568765-4569284 Caenorhabditis elegans
Exon10272   227   I: 4569583-4569809 Caenorhabditis elegans
Exon10273   167   I: 4569861-4570027 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1007.1.1 4568765 4570027 -1

1 Sequence

Length
914

1 Sequence Ontology Term

Identifier Name Description
transcript