WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1007.10b.1 Sequence Name  D1007.10b.1
Length (nt)  1238   Chromosome Location  I: 4586273-4589393
Chromosome . Primary Identifier  I Chromosome Location . Start  4586273
Chromosome Location . End  4589393 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1007.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017007 D1007.10 D1007.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1007.10b D1007.10b 1200   I: 4586274-4586524

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1007.10b.1 4586273 4589393 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10318   252   I: 4586273-4586524 Caenorhabditis elegans
Exon10320   285   I: 4586575-4586859 Caenorhabditis elegans
Exon10323   148   I: 4587748-4587895 Caenorhabditis elegans
Exon10325   174   I: 4587945-4588118 Caenorhabditis elegans
Exon10327   90   I: 4588293-4588382 Caenorhabditis elegans
Exon10329   135   I: 4588794-4588928 Caenorhabditis elegans
Exon10330   154   I: 4589240-4589393 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1007.10b.1 4586273 4589393 1

1 Sequence

Length
1238

1 Sequence Ontology Term

Identifier Name Description
transcript