WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y119C1A.1.1 Sequence Name  Y119C1A.1.1
Length (nt)  1396   Chromosome Location  I: 4641003-4644069
Chromosome . Primary Identifier  I Chromosome Location . Start  4641003
Chromosome Location . End  4644069 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y119C1A.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00022466 Y119C1A.1 Y119C1A.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y119C1A.1 Y119C1A.1 978   I: 4641407-4641597

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1A.1.1 4641003 4644069 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10438   595   I: 4641003-4641597 Caenorhabditis elegans
Exon10439   234   I: 4642016-4642249 Caenorhabditis elegans
Exon10440   237   I: 4642464-4642700 Caenorhabditis elegans
Exon10441   229   I: 4643024-4643252 Caenorhabditis elegans
Exon10442   101   I: 4643969-4644069 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y119C1A.1.1 4641003 4644069 -1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript