WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0041.5a.1 Sequence Name  B0041.5a.1
Length (nt)  1535   Chromosome Location  I: 4648263-4650770
Chromosome . Primary Identifier  I Chromosome Location . Start  4648263
Chromosome Location . End  4650770 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0041.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015009 B0041.5 B0041.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0041.5a B0041.5a 1290   I: 4648440-4648741

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0041.5a.1 4648263 4650770 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10454   479   I: 4648263-4648741 Caenorhabditis elegans
Exon10456   304   I: 4648798-4649101 Caenorhabditis elegans
Exon10458   147   I: 4649179-4649325 Caenorhabditis elegans
Exon10459   132   I: 4649611-4649742 Caenorhabditis elegans
Exon10461   294   I: 4650249-4650542 Caenorhabditis elegans
Exon10463   179   I: 4650592-4650770 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0041.5a.1 4648263 4650770 -1

1 Sequence

Length
1535

1 Sequence Ontology Term

Identifier Name Description
transcript