WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0041.2f.1 Sequence Name  B0041.2f.1
Length (nt)  3066   Chromosome Location  I: 4653473-4660148
Chromosome . Primary Identifier  I Chromosome Location . Start  4653473
Chromosome Location . End  4660148 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0041.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015007 ain-2 B0041.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0041.2f B0041.2f 2181   I: 4653527-4653542

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0041.2f.1 4653473 4660148 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10473   70   I: 4653473-4653542 Caenorhabditis elegans
Exon10481   89   I: 4653598-4653686 Caenorhabditis elegans
Exon10488   148   I: 4655349-4655496 Caenorhabditis elegans
Exon10496   738   I: 4655721-4656458 Caenorhabditis elegans
Exon10504   270   I: 4656511-4656780 Caenorhabditis elegans
Exon10510   216   I: 4657212-4657427 Caenorhabditis elegans
Exon10520   317   I: 4657939-4658255 Caenorhabditis elegans
Exon10528   78   I: 4658685-4658762 Caenorhabditis elegans
Exon10532   1140   I: 4659009-4660148 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0041.2f.1 4653473 4660148 1

1 Sequence

Length
3066

1 Sequence Ontology Term

Identifier Name Description
transcript