WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D7.3a Sequence Name  F54D7.3a
Length (nt)  1206   Chromosome Location  I: 4800098-4800237
Chromosome . Primary Identifier  I Chromosome Location . Start  4800098
Chromosome Location . End  4800237
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D7.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE17102 GNRR-1, isoform a 46.2 401 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00048320
WBRNAi00072213
WBRNAi00032799

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D7.3a 4800098 4800237 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018798 gnrr-1 F54D7.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D7.3a 4800098 4800237 1
CDS:F54D7.3a 4800889 4801024 1
CDS:F54D7.3a 4801784 4802059 1
CDS:F54D7.3a 4802451 4802580 1
CDS:F54D7.3a 4802930 4803272 1
CDS:F54D7.3a 4803991 4804171 1

1 Sequence

Length
1206

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D7.3a.1 F54D7.3a.1 1545   I: 4799981-4804393