WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C9.4a.1 Sequence Name  F57C9.4a.1
Length (nt)  2879   Chromosome Location  I: 4830135-4835619
Chromosome . Primary Identifier  I Chromosome Location . Start  4830135
Chromosome Location . End  4835619 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C9.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019011 F57C9.4 F57C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C9.4a F57C9.4a 1962   I: 4830140-4830256

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C9.4a.1 4830135 4835619 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10820   122   I: 4830135-4830256 Caenorhabditis elegans
Exon10823   291   I: 4830310-4830600 Caenorhabditis elegans
Exon10826   78   I: 4830646-4830723 Caenorhabditis elegans
Exon10829   280   I: 4831233-4831512 Caenorhabditis elegans
Exon10832   168   I: 4831829-4831996 Caenorhabditis elegans
Exon10834   101   I: 4832045-4832145 Caenorhabditis elegans
Exon10836   114   I: 4832194-4832307 Caenorhabditis elegans
Exon10838   252   I: 4832354-4832605 Caenorhabditis elegans
Exon10840   112   I: 4832649-4832760 Caenorhabditis elegans
Exon10842   73   I: 4832812-4832884 Caenorhabditis elegans
Exon10844   108   I: 4832934-4833041 Caenorhabditis elegans
Exon10846   174   I: 4833470-4833643 Caenorhabditis elegans
Exon10849   344   I: 4833691-4834034 Caenorhabditis elegans
Exon10852   319   I: 4834082-4834400 Caenorhabditis elegans
Exon10855   91   I: 4834855-4834945 Caenorhabditis elegans
Exon10858   252   I: 4835368-4835619 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C9.4a.1 4830135 4835619 1

1 Sequence

Length
2879

1 Sequence Ontology Term

Identifier Name Description
transcript