WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F57C9.4b.1 Sequence Name  F57C9.4b.1
Length (nt)  2664   Chromosome Location  I: 4830140-4835622
Chromosome . Primary Identifier  I Chromosome Location . Start  4830140
Chromosome Location . End  4835622 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F57C9.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00019011 F57C9.4 F57C9.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F57C9.4b F57C9.4b 2571   I: 4830140-4830256

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F57C9.4b.1 4830140 4835622 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10822   117   I: 4830140-4830256 Caenorhabditis elegans
Exon10824   291   I: 4830310-4830600 Caenorhabditis elegans
Exon10827   78   I: 4830646-4830723 Caenorhabditis elegans
Exon10830   280   I: 4831233-4831512 Caenorhabditis elegans
Exon10833   168   I: 4831829-4831996 Caenorhabditis elegans
Exon10835   101   I: 4832045-4832145 Caenorhabditis elegans
Exon10837   114   I: 4832194-4832307 Caenorhabditis elegans
Exon10839   252   I: 4832354-4832605 Caenorhabditis elegans
Exon10841   112   I: 4832649-4832760 Caenorhabditis elegans
Exon10843   73   I: 4832812-4832884 Caenorhabditis elegans
Exon10845   108   I: 4832934-4833041 Caenorhabditis elegans
Exon10847   174   I: 4833470-4833643 Caenorhabditis elegans
Exon10848   44   I: 4833691-4833734 Caenorhabditis elegans
Exon10850   87   I: 4833948-4834034 Caenorhabditis elegans
Exon10853   319   I: 4834082-4834400 Caenorhabditis elegans
Exon10856   91   I: 4834855-4834945 Caenorhabditis elegans
Exon10860   255   I: 4835368-4835622 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F57C9.4b.1 4830140 4835622 1

1 Sequence

Length
2664

1 Sequence Ontology Term

Identifier Name Description
transcript