WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01F4.2b.1 Sequence Name  C01F4.2b.1
Length (nt)  1869   Chromosome Location  I: 4852703-4867822
Chromosome . Primary Identifier  I Chromosome Location . Start  4852703
Chromosome Location . End  4867822 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01F4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015303 rga-6 C01F4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01F4.2b C01F4.2b 1869   I: 4852703-4853309

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01F4.2b.1 4852703 4867822 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10895   607   I: 4852703-4853309 Caenorhabditis elegans
Exon10898   208   I: 4853620-4853827 Caenorhabditis elegans
Exon10900   157   I: 4853889-4854045 Caenorhabditis elegans
Exon10902   121   I: 4854384-4854504 Caenorhabditis elegans
Exon10904   167   I: 4855847-4856013 Caenorhabditis elegans
Exon10911   157   I: 4864609-4864765 Caenorhabditis elegans
Exon10913   84   I: 4866924-4867007 Caenorhabditis elegans
Exon10915   133   I: 4867143-4867275 Caenorhabditis elegans
Exon10916   235   I: 4867588-4867822 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01F4.2b.1 4852703 4867822 -1

1 Sequence

Length
1869

1 Sequence Ontology Term

Identifier Name Description
transcript