WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25F8.1.1 Sequence Name  F25F8.1.1
Length (nt)  2093   Chromosome Location  I: 4884903-4895516
Chromosome . Primary Identifier  I Chromosome Location . Start  4884903
Chromosome Location . End  4895516 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25F8.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017795 F25F8.1 F25F8.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F8.1 F25F8.1 1893   I: 4884913-4885049

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25F8.1.1 4884903 4895516 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10921   147   I: 4884903-4885049 Caenorhabditis elegans
Exon10931   69   I: 4891867-4891935 Caenorhabditis elegans
Exon10932   288   I: 4892257-4892544 Caenorhabditis elegans
Exon10933   165   I: 4892589-4892753 Caenorhabditis elegans
Exon10934   250   I: 4892802-4893051 Caenorhabditis elegans
Exon10936   145   I: 4893625-4893769 Caenorhabditis elegans
Exon10937   100   I: 4893825-4893924 Caenorhabditis elegans
Exon10938   291   I: 4894275-4894565 Caenorhabditis elegans
Exon10939   154   I: 4894792-4894945 Caenorhabditis elegans
Exon10940   141   I: 4894989-4895129 Caenorhabditis elegans
Exon10941   343   I: 4895174-4895516 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25F8.1.1 4884903 4895516 1

1 Sequence

Length
2093

1 Sequence Ontology Term

Identifier Name Description
transcript