WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.8.2 Sequence Name  F28B3.8.2
Length (nt)  3507   Chromosome Location  I: 4920683-4926486
Chromosome . Primary Identifier  I Chromosome Location . Start  4920683
Chromosome Location . End  4926486 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.8.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002075 imb-1 F28B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.8 F28B3.8 2691   I: 4921403-4921444

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.8.2 4920683 4926486 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10981   762   I: 4920683-4921444 Caenorhabditis elegans
Exon10984   87   I: 4921998-4922084 Caenorhabditis elegans
Exon10986   183   I: 4922130-4922312 Caenorhabditis elegans
Exon10988   96   I: 4922941-4923036 Caenorhabditis elegans
Exon10990   150   I: 4923083-4923232 Caenorhabditis elegans
Exon10992   191   I: 4923291-4923481 Caenorhabditis elegans
Exon10994   250   I: 4923534-4923783 Caenorhabditis elegans
Exon10996   258   I: 4923832-4924089 Caenorhabditis elegans
Exon10998   519   I: 4924141-4924659 Caenorhabditis elegans
Exon11000   261   I: 4924892-4925152 Caenorhabditis elegans
Exon11002   264   I: 4925395-4925658 Caenorhabditis elegans
Exon11004   136   I: 4925707-4925842 Caenorhabditis elegans
Exon11006   196   I: 4925890-4926085 Caenorhabditis elegans
Exon11008   96   I: 4926138-4926233 Caenorhabditis elegans
Exon11009   58   I: 4926429-4926486 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.8.2 4920683 4926486 -1

1 Sequence

Length
3507

1 Sequence Ontology Term

Identifier Name Description
transcript