WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F28B3.8.1 Sequence Name  F28B3.8.1
Length (nt)  3373   Chromosome Location  I: 4920759-4926233
Chromosome . Primary Identifier  I Chromosome Location . Start  4920759
Chromosome Location . End  4926233 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002075 imb-1 F28B3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.8 F28B3.8 2691   I: 4921403-4921444

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.8.1 4920759 4926233 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon10982   686   I: 4920759-4921444 Caenorhabditis elegans
Exon10983   87   I: 4921998-4922084 Caenorhabditis elegans
Exon10985   183   I: 4922130-4922312 Caenorhabditis elegans
Exon10987   96   I: 4922941-4923036 Caenorhabditis elegans
Exon10989   150   I: 4923083-4923232 Caenorhabditis elegans
Exon10991   191   I: 4923291-4923481 Caenorhabditis elegans
Exon10993   250   I: 4923534-4923783 Caenorhabditis elegans
Exon10995   258   I: 4923832-4924089 Caenorhabditis elegans
Exon10997   519   I: 4924141-4924659 Caenorhabditis elegans
Exon10999   261   I: 4924892-4925152 Caenorhabditis elegans
Exon11001   264   I: 4925395-4925658 Caenorhabditis elegans
Exon11003   136   I: 4925707-4925842 Caenorhabditis elegans
Exon11005   196   I: 4925890-4926085 Caenorhabditis elegans
Exon11007   96   I: 4926138-4926233 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.8.1 4920759 4926233 -1

1 Sequence

Length
3373

1 Sequence Ontology Term

Identifier Name Description
transcript