WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.5a.1 Sequence Name  F28B3.5a.1
Length (nt)  1694   Chromosome Location  I: 4926647-4928840
Chromosome . Primary Identifier  I Chromosome Location . Start  4926647
Chromosome Location . End  4928840 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.5a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017886 mfsd-13.1 F28B3.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.5a F28B3.5a 1407   I: 4926733-4926789

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.5a.1 4926647 4928840 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11011   143   I: 4926647-4926789 Caenorhabditis elegans
Exon11012   132   I: 4926834-4926965 Caenorhabditis elegans
Exon11014   318   I: 4927018-4927335 Caenorhabditis elegans
Exon11016   548   I: 4927383-4927930 Caenorhabditis elegans
Exon11018   193   I: 4928241-4928433 Caenorhabditis elegans
Exon11020   360   I: 4928481-4928840 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.5a.1 4926647 4928840 1

1 Sequence

Length
1694

1 Sequence Ontology Term

Identifier Name Description
transcript