WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.9.2 Sequence Name  F28B3.9.2
Length (nt)  1473   Chromosome Location  I: 4929093-4932178
Chromosome . Primary Identifier  I Chromosome Location . Start  4929093
Chromosome Location . End  4932178 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.9.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017888 acl-11 F28B3.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.9 F28B3.9 1107   I: 4929099-4929710

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.9.2 4929093 4932178 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11022   618   I: 4929093-4929710 Caenorhabditis elegans
Exon11025   119   I: 4930428-4930546 Caenorhabditis elegans
Exon11027   106   I: 4930601-4930706 Caenorhabditis elegans
Exon11029   62   I: 4931498-4931559 Caenorhabditis elegans
Exon11031   568   I: 4931611-4932178 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.9.2 4929093 4932178 1

1 Sequence

Length
1473

1 Sequence Ontology Term

Identifier Name Description
transcript