WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.4b.1 Sequence Name  F28B3.4b.1
Length (nt)  5439   Chromosome Location  I: 4934259-4949331
Chromosome . Primary Identifier  I Chromosome Location . Start  4934259
Chromosome Location . End  4949331 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017885 dip-2 F28B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.4b F28B3.4b 5046   I: 4934262-4934412

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4b.1 4934259 4949331 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11033   154   I: 4934259-4934412 Caenorhabditis elegans
Exon11035   96   I: 4935106-4935201 Caenorhabditis elegans
Exon11037   168   I: 4935256-4935423 Caenorhabditis elegans
Exon11042   105   I: 4938200-4938304 Caenorhabditis elegans
Exon11046   185   I: 4938794-4938978 Caenorhabditis elegans
Exon11050   153   I: 4939597-4939749 Caenorhabditis elegans
Exon11054   142   I: 4940224-4940365 Caenorhabditis elegans
Exon11058   56   I: 4940920-4940975 Caenorhabditis elegans
Exon11064   176   I: 4943630-4943805 Caenorhabditis elegans
Exon11072   532   I: 4943864-4944395 Caenorhabditis elegans
Exon11080   169   I: 4944448-4944616 Caenorhabditis elegans
Exon11088   518   I: 4945235-4945752 Caenorhabditis elegans
Exon11096   465   I: 4945866-4946330 Caenorhabditis elegans
Exon11104   312   I: 4946649-4946960 Caenorhabditis elegans
Exon11112   1565   I: 4947020-4948584 Caenorhabditis elegans
Exon11125   643   I: 4948689-4949331 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4b.1 4934259 4949331 1

1 Sequence

Length
5439

1 Sequence Ontology Term

Identifier Name Description
transcript