WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.4i.1 Sequence Name  F28B3.4i.1
Length (nt)  4968   Chromosome Location  I: 4937770-4948941
Chromosome . Primary Identifier  I Chromosome Location . Start  4937770
Chromosome Location . End  4948941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.4i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017885 dip-2 F28B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.4i F28B3.4i 4968   I: 4937770-4938106

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4i.1 4937770 4948941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11039   337   I: 4937770-4938106 Caenorhabditis elegans
Exon11044   105   I: 4938200-4938304 Caenorhabditis elegans
Exon11048   185   I: 4938794-4938978 Caenorhabditis elegans
Exon11052   153   I: 4939597-4939749 Caenorhabditis elegans
Exon11056   142   I: 4940224-4940365 Caenorhabditis elegans
Exon11060   56   I: 4940920-4940975 Caenorhabditis elegans
Exon11068   176   I: 4943630-4943805 Caenorhabditis elegans
Exon11075   532   I: 4943864-4944395 Caenorhabditis elegans
Exon11086   169   I: 4944448-4944616 Caenorhabditis elegans
Exon11094   518   I: 4945235-4945752 Caenorhabditis elegans
Exon11102   465   I: 4945866-4946330 Caenorhabditis elegans
Exon11110   312   I: 4946649-4946960 Caenorhabditis elegans
Exon11118   1565   I: 4947020-4948584 Caenorhabditis elegans
Exon11123   253   I: 4948689-4948941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4i.1 4937770 4948941 1

1 Sequence

Length
4968

1 Sequence Ontology Term

Identifier Name Description
transcript