WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F28B3.4i Sequence Name  F28B3.4i
Length (nt)  4968   Chromosome Location  I: 4937770-4938106
Chromosome . Primary Identifier  I Chromosome Location . Start  4937770
Chromosome Location . End  4938106
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.4i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49786 DIP-2, isoform i 179.2 1655 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00045783
WBRNAi00045787
WBRNAi00003507
WBRNAi00022340
WBRNAi00025287
WBRNAi00025288

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:F28B3.4i 4937770 4938106 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017885 dip-2 F28B3.4 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier 		Start End Strand
CDS:F28B3.4i 4937770 4938106 1
CDS:F28B3.4i 4938200 4938304 1
CDS:F28B3.4i 4938794 4938978 1
CDS:F28B3.4i 4939597 4939749 1
CDS:F28B3.4i 4940224 4940365 1
CDS:F28B3.4i 4940920 4940975 1
CDS:F28B3.4i 4943630 4943805 1
CDS:F28B3.4i 4943864 4944395 1
CDS:F28B3.4i 4944448 4944616 1
CDS:F28B3.4i 4945235 4945752 1
CDS:F28B3.4i 4945866 4946330 1
CDS:F28B3.4i 4946649 4946960 1
CDS:F28B3.4i 4947020 4948584 1
CDS:F28B3.4i 4948689 4948941 1

1 Sequence

Length
4968

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F28B3.4i.1 F28B3.4i.1 4968   I: 4937770-4948941