WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F28B3.4j.1 Sequence Name  F28B3.4j.1
Length (nt)  4962   Chromosome Location  I: 4937770-4948941
Chromosome . Primary Identifier  I Chromosome Location . Start  4937770
Chromosome Location . End  4948941 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F28B3.4j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017885 dip-2 F28B3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F28B3.4j F28B3.4j 4962   I: 4937770-4938106

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4j.1 4937770 4948941 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11040   337   I: 4937770-4938106 Caenorhabditis elegans
Exon11045   105   I: 4938200-4938304 Caenorhabditis elegans
Exon11049   185   I: 4938794-4938978 Caenorhabditis elegans
Exon11053   153   I: 4939597-4939749 Caenorhabditis elegans
Exon11057   142   I: 4940224-4940365 Caenorhabditis elegans
Exon11061   56   I: 4940920-4940975 Caenorhabditis elegans
Exon11069   176   I: 4943630-4943805 Caenorhabditis elegans
Exon11079   526   I: 4943870-4944395 Caenorhabditis elegans
Exon11087   169   I: 4944448-4944616 Caenorhabditis elegans
Exon11095   518   I: 4945235-4945752 Caenorhabditis elegans
Exon11103   465   I: 4945866-4946330 Caenorhabditis elegans
Exon11111   312   I: 4946649-4946960 Caenorhabditis elegans
Exon11119   1565   I: 4947020-4948584 Caenorhabditis elegans
Exon11124   253   I: 4948689-4948941 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F28B3.4j.1 4937770 4948941 1

1 Sequence

Length
4962

1 Sequence Ontology Term

Identifier Name Description
transcript