WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G9.1.1 Sequence Name  W03G9.1.1
Length (nt)  2316   Chromosome Location  I: 4980307-4983959
Chromosome . Primary Identifier  I Chromosome Location . Start  4980307
Chromosome Location . End  4983959 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G9.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004900 snf-1 W03G9.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G9.1 W03G9.1 1854   I: 4980330-4980498

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.1.1 4980307 4983959 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11196   192   I: 4980307-4980498 Caenorhabditis elegans
Exon11197   135   I: 4980814-4980948 Caenorhabditis elegans
Exon11198   262   I: 4981195-4981456 Caenorhabditis elegans
Exon11199   372   I: 4981649-4982020 Caenorhabditis elegans
Exon11200   229   I: 4982213-4982441 Caenorhabditis elegans
Exon11201   238   I: 4982538-4982775 Caenorhabditis elegans
Exon11202   302   I: 4982850-4983151 Caenorhabditis elegans
Exon11203   586   I: 4983374-4983959 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.1.1 4980307 4983959 1

1 Sequence

Length
2316

1 Sequence Ontology Term

Identifier Name Description
transcript