WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G9.6.2 Sequence Name  W03G9.6.2
Length (nt)  1294   Chromosome Location  I: 4984705-4986641
Chromosome . Primary Identifier  I Chromosome Location . Start  4984705
Chromosome Location . End  4986641 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G9.6.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003906 paf-1 W03G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G9.6 W03G9.6 1155   I: 4984819-4984974

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.6.2 4984705 4986641 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11206   270   I: 4984705-4984974 Caenorhabditis elegans
Exon11209   450   I: 4985228-4985677 Caenorhabditis elegans
Exon11211   124   I: 4985721-4985844 Caenorhabditis elegans
Exon11213   156   I: 4985922-4986077 Caenorhabditis elegans
Exon11215   128   I: 4986120-4986247 Caenorhabditis elegans
Exon11217   166   I: 4986476-4986641 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.6.2 4984705 4986641 -1

1 Sequence

Length
1294

1 Sequence Ontology Term

Identifier Name Description
transcript