WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W03G9.6.1 Sequence Name  W03G9.6.1
Length (nt)  1335   Chromosome Location  I: 4984718-4986739
Chromosome . Primary Identifier  I Chromosome Location . Start  4984718
Chromosome Location . End  4986739 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W03G9.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003906 paf-1 W03G9.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W03G9.6 W03G9.6 1155   I: 4984819-4984974

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.6.1 4984718 4986739 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11207   257   I: 4984718-4984974 Caenorhabditis elegans
Exon11208   450   I: 4985228-4985677 Caenorhabditis elegans
Exon11210   124   I: 4985721-4985844 Caenorhabditis elegans
Exon11212   156   I: 4985922-4986077 Caenorhabditis elegans
Exon11214   128   I: 4986120-4986247 Caenorhabditis elegans
Exon11216   148   I: 4986476-4986623 Caenorhabditis elegans
Exon11218   72   I: 4986668-4986739 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W03G9.6.1 4984718 4986739 -1

1 Sequence

Length
1335

1 Sequence Ontology Term

Identifier Name Description
transcript