WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F54C1.5b.3 Sequence Name  F54C1.5b.3
Length (nt)  2256   Chromosome Location  I: 4989700-4994638
Chromosome . Primary Identifier  I Chromosome Location . Start  4989700
Chromosome Location . End  4994638 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54C1.5b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001117 dyf-1 F54C1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54C1.5b F54C1.5b 1794   I: 4989700-4990020

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.5b.3 4989700 4994638 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11231   321   I: 4989700-4990020 Caenorhabditis elegans
Exon11235   195   I: 4990079-4990273 Caenorhabditis elegans
Exon11240   136   I: 4990318-4990453 Caenorhabditis elegans
Exon11245   290   I: 4990756-4991045 Caenorhabditis elegans
Exon11250   189   I: 4991089-4991277 Caenorhabditis elegans
Exon11255   80   I: 4991574-4991653 Caenorhabditis elegans
Exon11260   129   I: 4991700-4991828 Caenorhabditis elegans
Exon11265   109   I: 4991875-4991983 Caenorhabditis elegans
Exon11270   63   I: 4992538-4992600 Caenorhabditis elegans
Exon11275   153   I: 4992649-4992801 Caenorhabditis elegans
Exon11279   183   I: 4993324-4993506 Caenorhabditis elegans
Exon11283   408   I: 4994231-4994638 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F54C1.5b.3 4989700 4994638 -1

1 Sequence

Length
2256

1 Sequence Ontology Term

Identifier Name Description
transcript