WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C46H11.4f Sequence Name  C46H11.4f
Length (nt)  1278   Chromosome Location  I: 5029190-5029230
Chromosome . Primary Identifier  I Chromosome Location . Start  5029190
Chromosome Location . End  5029230
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.4f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52138 LFE-2, isoform f 48.7 425 Caenorhabditis elegans
 

Other

9 RNAi

WormBase ID
WBRNAi00007487
WBRNAi00042627
WBRNAi00042628
WBRNAi00003167
WBRNAi00003168
WBRNAi00062771
WBRNAi00027799
WBRNAi00062776
WBRNAi00066573

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C46H11.4f 5029190 5029230 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002979 lfe-2 C46H11.4 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:C46H11.4f 5029190 5029230 1
CDS:C46H11.4f 5030867 5031017 1
CDS:C46H11.4f 5036734 5036853 1
CDS:C46H11.4f 5038545 5038638 1
CDS:C46H11.4f 5038695 5038844 1
CDS:C46H11.4f 5038929 5039203 1
CDS:C46H11.4f 5039589 5039939 1
CDS:C46H11.4f 5040670 5040765 1

1 Sequence

Length
1278

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C46H11.4f.1 C46H11.4f.1 1757   I: 5028859-5041158
Transcript:C46H11.4f.2 C46H11.4f.2 1701   I: 5029159-5041157