WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46H11.8.1 Sequence Name  C46H11.8.1
Length (nt)  982   Chromosome Location  I: 5044198-5045720
Chromosome . Primary Identifier  I Chromosome Location . Start  5044198
Chromosome Location . End  5045720 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016732 phat-1 C46H11.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46H11.8 C46H11.8 885   I: 5044295-5044434

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.8.1 5044198 5045720 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11459   237   I: 5044198-5044434 Caenorhabditis elegans
Exon11460   180   I: 5044516-5044695 Caenorhabditis elegans
Exon11462   414   I: 5045066-5045479 Caenorhabditis elegans
Exon11463   75   I: 5045524-5045598 Caenorhabditis elegans
Exon11464   76   I: 5045645-5045720 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.8.1 5044198 5045720 -1

1 Sequence

Length
982

1 Sequence Ontology Term

Identifier Name Description
transcript