WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C46H11.10b.1 Sequence Name  C46H11.10b.1
Length (nt)  1396   Chromosome Location  I: 5052414-5055000
Chromosome . Primary Identifier  I Chromosome Location . Start  5052414
Chromosome Location . End  5055000 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C46H11.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016734 C46H11.10 C46H11.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C46H11.10b C46H11.10b 726   I: 5052706-5052930

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.10b.1 5052414 5055000 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon11478   517   I: 5052414-5052930 Caenorhabditis elegans
Exon11483   141   I: 5053354-5053494 Caenorhabditis elegans
Exon11487   165   I: 5053542-5053706 Caenorhabditis elegans
Exon11490   216   I: 5053898-5054113 Caenorhabditis elegans
Exon11494   177   I: 5054162-5054338 Caenorhabditis elegans
Exon11498   180   I: 5054821-5055000 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C46H11.10b.1 5052414 5055000 -1

1 Sequence

Length
1396

1 Sequence Ontology Term

Identifier Name Description
transcript